HL_28ZY_036

3D structure

PDB id

28ZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGGGUCGGCCCACGGCC

Length

17 nucleotides

Bulged bases

28ZY|1|S2|G|1760, 28ZY|1|S2|C|1762, 28ZY|1|S2|G|1763, 28ZY|1|S2|G|1764, 28ZY|1|S2|C|1765, 28ZY|1|S2|C|1766, 28ZY|1|S2|C|1767, 28ZY|1|S2|A|1768, 28ZY|1|S2|C|1769, 28ZY|1|S2|G|1770, 28ZY|1|S2|C|1772

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZY|1|S2|G|1757
28ZY|1|S2|G|1758
28ZY|1|S2|G|1759
28ZY|1|S2|G|1760
28ZY|1|S2|U|1761
28ZY|1|S2|C|1762
28ZY|1|S2|G|1763
28ZY|1|S2|G|1764
28ZY|1|S2|C|1765
28ZY|1|S2|C|1766
28ZY|1|S2|C|1767
28ZY|1|S2|A|1768
28ZY|1|S2|C|1769
28ZY|1|S2|G|1770
28ZY|1|S2|G|1771
28ZY|1|S2|C|1772
28ZY|1|S2|C|1773

Current chains

Chain S2

18S ribosomal RNA

Nearby chains