HL_2B3J_003

3D structure

PDB id

2B3J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Staphylococcus aureus tRNA Adenosine Deaminase, TadA, in Complex with RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2 Å

Loop

Sequence

CU(P5P)CGG

Length

6 nucleotides

Bulged bases

2B3J|1|G|U|33, 2B3J|1|G|C|35

QA status

Modified nucleotides: P5P

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Mini UNCG with extended bulge

Broad Annotation

Mini UNCG with extended bulge

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

2B3J|1|G|C|32
2B3J|1|G|U|33
2B3J|1|G|P5P|34
2B3J|1|G|C|35
2B3J|1|G|G|36
2B3J|1|G|G|37

Current chains

Chain G

anticodon stem-loop of t-RNA-Arg2 (nucleotides 27-42)

Nearby chains

Chain C

tRNA adenosine deaminase

Chain D

tRNA adenosine deaminase