HL_2DLC_002

3D structure

PDB id

2DLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the ternary complex of yeast tyrosyl-tRNA synthetase

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CAAGG(PSU)A(6IA)A(PSU)UG

Length

12 nucleotides

Bulged bases

2DLC|1|Y|G|534, 2DLC|1|Y|A|536, 2DLC|1|Y|A|538

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2DLC|1|Y|C|527
2DLC|1|Y|A|528
2DLC|1|Y|A|529
2DLC|1|Y|G|530
2DLC|1|Y|G|534
2DLC|1|Y|PSU|535
2DLC|1|Y|A|536
2DLC|1|Y|6IA|537
2DLC|1|Y|A|538
2DLC|1|Y|PSU|539
2DLC|1|Y|U|542
2DLC|1|Y|G|543

Current chains

Chain Y

T-RNA (76-MER)

Nearby chains

Chain X

Tyrosyl-tRNA synthetase, cytoplasmic