HL_2HHH_026

3D structure

PDB id

2HHH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of kasugamycin bound to the 30S ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.35 Å

Loop

Sequence

GUUCGGC

Length

7 nucleotides

Bulged bases

2HHH|1|A|U|1119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2HHH_026 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.2363

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2HHH|1|A|G|1117
2HHH|1|A|U|1118
2HHH|1|A|U|1119
2HHH|1|A|C|1120
2HHH|1|A|G|1121
2HHH|1|A|G|1122
2HHH|1|A|C|1123

Current chains

Chain A

16S ribosomal RNA

Nearby chains