HL_2HO7_002

3D structure

PDB id

2HO7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme bound to glucose-6-phosphate

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AGGGCAGGGUUUAU

Length

14 nucleotides

Bulged bases

2HO7|1|B|G|41, 2HO7|1|B|U|49

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_25195.1

Basepair signature

cWW-cWH-R-R-R-R-R-R-R

Number of instances in this motif group

1

Unit IDs

2HO7|1|B|A|38
2HO7|1|B|G|39
2HO7|1|B|G|40
2HO7|1|B|G|41
2HO7|1|B|C|42
2HO7|1|B|A|43
2HO7|1|B|G|44
2HO7|1|B|G|45
2HO7|1|B|G|46
2HO7|1|B|U|47
2HO7|1|B|U|48
2HO7|1|B|U|49
2HO7|1|B|A|50
2HO7|1|B|U|51

Current chains

Chain B

glmS ribozyme RNA

Nearby chains

Chain A

glmS ribozyme substrate RNA