HL_2I82_001

3D structure

PDB id

2I82 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of pseudouridine synthase RluA: indirect sequence readout through protein-induced RNA structure

Experimental method

X-RAY DIFFRACTION

Resolution

2.05 Å

Loop

Sequence

GANUGAAAAUC

Length

11 nucleotides

Bulged bases

2I82|1|E|G|1210, 2I82|1|E|A|1213

QA status

Modified nucleotides:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2I82|1|E|G|1206
2I82|1|E|A|1207
2I82|1|E|N|1208
2I82|1|E|U|1209
2I82|1|E|G|1210
2I82|1|E|A|1211
2I82|1|E|A|1212
2I82|1|E|A|1213
2I82|1|E|A|1214
2I82|1|E|U|1215
2I82|1|E|C|1216

Current chains

Chain E

5'-R(*GP*AP*GP*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP*CP*UP*C)-3'

Nearby chains

Chain A

Ribosomal large subunit pseudouridine synthase A