HL_2I82_004

3D structure

PDB id

2I82 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of pseudouridine synthase RluA: indirect sequence readout through protein-induced RNA structure

Experimental method

X-RAY DIFFRACTION

Resolution

2.05 Å

Loop

Sequence

GANUGAAAUC*C

Length

11 nucleotides

Bulged bases

2I82|1|H|G|1510

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2I82|1|H|G|1506
2I82|1|H|A|1507
2I82|1|H|N|1508
2I82|1|H|U|1509
2I82|1|H|G|1510
2I82|1|H|A|1511
2I82|1|H|A|1512
2I82|1|H|A|1514
2I82|1|H|U|1515
2I82|1|H|C|1516
*
2I82|1|H|C|1516

Current chains

Chain H

5'-R(*GP*AP*GP*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP*CP*UP*C)-3'

Nearby chains

Chain D

Ribosomal large subunit pseudouridine synthase A

Chain G

5'-R(*GP*AP*GP*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP*CP*UP*C)-3'