3D structure

PDB id
2IZN (explore in PDB, NAKB, or RNA 3D Hub)
Description
MS2-RNA HAIRPIN (G-10) COMPLEX
Experimental method
X-RAY DIFFRACTION
Resolution
2.56 Å

Loop

Sequence
GAUUAC
Length
6 nucleotides
Bulged bases (A, C, G, U)
10U, 12A
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_97896.2
Basepair signature
cWW-F
Number of instances in this motif group
8

Unit IDs

2IZN|1|R|G|8||||P_1
2IZN|1|R|A|9||||P_1
2IZN|1|R|U|10||||P_1
2IZN|1|R|U|11||||P_1
2IZN|1|R|A|12||||P_1
2IZN|1|R|C|13||||P_1

Current chains

Chain R
5'-R(*AP*CP*AP*UP*CP*GP*CP*GP*AP*UP *UP*AP*CP*GP*GP*AP*UP*GP*U)-3'

Nearby chains

Chain A
MS2 COAT PROTEIN
Chain B
MS2 COAT PROTEIN
Chain C
MS2 COAT PROTEIN

Coloring options:

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