HL_2JL5_005

3D structure

PDB id

2JL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome (Part 1 of 4). This file contains the 30S subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

2JL5|1|A|U|202, 2JL5|1|A|U|204

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2JL5_005 not in the Motif Atlas

Geometric match to HL_6CZR_089

Geometric discrepancy: 0.2995

The information below is about HL_6CZR_089

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.1

Basepair signature

cWW-F

Number of instances in this motif group

51

Unit IDs

2JL5|1|A|C|201
2JL5|1|A|U|202
2JL5|1|A|U|203
2JL5|1|A|U|204
2JL5|1|A|G|216

Current chains

Chain A

16S RRNA

Nearby chains