HL_2JL7_008

3D structure

PDB id

2JL7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome (part 3 of 4). This file contains the 30S subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2JL7_008 not in the Motif Atlas

Geometric match to HL_4LFB_008

Geometric discrepancy: 0.0901

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39665.1

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

2JL7|1|A|C|320
2JL7|1|A|A|321
2JL7|1|A|C|322
2JL7|1|A|U|323
2JL7|1|A|G|324
2JL7|1|A|A|325
2JL7|1|A|G|326
2JL7|1|A|A|327
2JL7|1|A|C|328
2JL7|1|A|A|329
2JL7|1|A|C|330
2JL7|1|A|G|331
2JL7|1|A|G|332
2JL7|1|A|G|333

Current chains

Chain A

16S RRNA

Nearby chains

Chain P

30S RIBOSOMAL PROTEIN S16

Chain T

30S RIBOSOMAL PROTEIN S20