HL_2MFE_011

3D structure

PDB id

2MFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Csr/Rsm protein-RNA recognition - A molecular affinity ruler: RsmZ(SL2)/RsmE(dimer) 2:1 complex

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

CAAGGACG

Length

8 nucleotides

Bulged bases

2MFE|6|B|A|26, 2MFE|6|B|C|30

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2MFE_011 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.1949

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

2MFE|6|B|C|24
2MFE|6|B|A|25
2MFE|6|B|A|26
2MFE|6|B|G|27
2MFE|6|B|G|28
2MFE|6|B|A|29
2MFE|6|B|C|30
2MFE|6|B|G|31

Current chains

Chain B

SL2(RsmZ) RNA

Nearby chains

Chain A

Carbon storage regulator homolog

Chain C

Carbon storage regulator homolog