HL_2N3O_017

3D structure

PDB id

2N3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of PTB RRM1(41-163) bound to an RNA stemloop containing a structured loop derived from viral internal ribosomal entry site RNA

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

GUCUUUC

Length

7 nucleotides

Bulged bases

2N3O|17|B|C|11

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2N3O|17|B|G|9
2N3O|17|B|U|10
2N3O|17|B|C|11
2N3O|17|B|U|12
2N3O|17|B|U|13
2N3O|17|B|U|14
2N3O|17|B|C|15

Current chains

Chain B

RNA (5'-R(*GP*GP*GP*AP*CP*CP*UP*GP*GP*UP*CP*UP*UP*UP*CP*CP*AP*GP*GP*UP*CP*CP*C)-3')

Nearby chains

Chain A

Polypyrimidine tract-binding protein 1