HL_2O44_075

3D structure

PDB id

2O44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCCUGCUGAAACAGUC

Length

16 nucleotides

Bulged bases

2O44|1|A|U|760, 2O44|1|A|A|764, 2O44|1|A|C|765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O44|1|A|G|754
2O44|1|A|C|755
2O44|1|A|C|756
2O44|1|A|U|757
2O44|1|A|G|758
2O44|1|A|C|759
2O44|1|A|U|760
2O44|1|A|G|761
2O44|1|A|A|762
2O44|1|A|A|763
2O44|1|A|A|764
2O44|1|A|C|765
2O44|1|A|A|766
2O44|1|A|G|767
2O44|1|A|U|768
2O44|1|A|C|769

Current chains

Chain A

23S rRNA

Nearby chains