HL_2O44_076

3D structure

PDB id

2O44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AACUCGCGAAGCGAGUU

Length

17 nucleotides

Bulged bases

2O44|1|A|G|1186, 2O44|1|A|A|1187, 2O44|1|A|A|1188

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O44|1|A|A|1179
2O44|1|A|A|1180
2O44|1|A|C|1181
2O44|1|A|U|1182
2O44|1|A|C|1183
2O44|1|A|G|1184
2O44|1|A|C|1185
2O44|1|A|G|1186
2O44|1|A|A|1187
2O44|1|A|A|1188
2O44|1|A|G|1189
2O44|1|A|C|1190
2O44|1|A|G|1191
2O44|1|A|A|1192
2O44|1|A|G|1193
2O44|1|A|U|1194
2O44|1|A|U|1195

Current chains

Chain A

23S rRNA

Nearby chains