HL_2QA4_031

3D structure

PDB id

2QA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUAACAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_2QA4_031 not in the Motif Atlas

Geometric match to HL_1MMS_002

Geometric discrepancy: 0.1551

The information below is about HL_1MMS_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

2QA4|1|0|C|1196
2QA4|1|0|G|1197
2QA4|1|0|U|1198
2QA4|1|0|A|1199
2QA4|1|0|A|1200
2QA4|1|0|C|1201
2QA4|1|0|A|1202
2QA4|1|0|G|1203

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains