HL_2QUW_004

3D structure

PDB id

2QUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hammerhead Ribozyme G12A mutant after cleavage

Experimental method

X-RAY DIFFRACTION

Resolution

2.2 Å

Loop

Sequence

AUGUGCUUU

Length

9 nucleotides

Bulged bases

2QUW|1|D|G|20, 2QUW|1|D|C|23, 2QUW|1|D|U|25

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50204.1

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

11

Unit IDs

2QUW|1|D|A|18
2QUW|1|D|U|19
2QUW|1|D|G|20
2QUW|1|D|U|21
2QUW|1|D|G|22
2QUW|1|D|C|23
2QUW|1|D|U|24
2QUW|1|D|U|25
2QUW|1|D|U|26

Current chains

Chain D

Hammerhead ribozyme, cleaved fragment

Nearby chains

Chain A

Hammerhead ribozyme, cleaved fragment

Chain B

Hammerhead ribozyme, cleaved fragment