HL_2VPL_001
3D structure
- PDB id
- 2VPL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the complex between the first domain of L1 protein from Thermus thermophilus and mRNA from Methanococcus jannaschii
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.3 Å
Loop
- Sequence
- CGAACUCG
- Length
- 8 nucleotides
- Bulged bases
- 2VPL|1|B|A|22, 2VPL|1|B|C|23, 2VPL|1|B|U|24
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_96524.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
2VPL|1|B|C|19
2VPL|1|B|G|20
2VPL|1|B|A|21
2VPL|1|B|A|22
2VPL|1|B|C|23
2VPL|1|B|U|24
2VPL|1|B|C|25
2VPL|1|B|G|26
Current chains
- Chain B
- FRAGMENT OF MRNA FOR L1-OPERON CONTAINING REGULATOR L1-BINDING SITE
Nearby chains
- Chain A
- 50S RIBOSOMAL PROTEIN L1
Coloring options: