HL_2XZM_025

3D structure

PDB id

2XZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. THIS FILE CONTAINS THE 40S SUBUNIT AND INITIATION FACTOR FOR MOLECULE 1

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

GACUCAACAC

Length

10 nucleotides

Bulged bases

2XZM|1|A|A|1168

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64543.1

Basepair signature

cWW-R-cSS-R-R-R-R

Number of instances in this motif group

4

Unit IDs

2XZM|1|A|G|1160
2XZM|1|A|A|1161
2XZM|1|A|C|1162
2XZM|1|A|U|1163
2XZM|1|A|C|1164
2XZM|1|A|A|1165
2XZM|1|A|A|1166
2XZM|1|A|C|1167
2XZM|1|A|A|1168
2XZM|1|A|C|1169

Current chains

Chain A

18S RRNA

Nearby chains

Chain 9

RPS31E

Chain I

RPS16E

Chain J

RIBOSOMAL PROTEIN S10 CONTAINING PROTEIN

Chain N

RPS29E