HL_2ZJP_057
3D structure
- PDB id
- 2ZJP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- CGUGUGGAAG
- Length
- 10 nucleotides
- Bulged bases
- 2ZJP|1|X|U|2385
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2ZJP_057 not in the Motif Atlas
- Homologous match to HL_4WF9_055
- Geometric discrepancy: 0.1493
- The information below is about HL_4WF9_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_51853.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
2ZJP|1|X|C|2383
2ZJP|1|X|G|2384
2ZJP|1|X|U|2385
2ZJP|1|X|G|2386
2ZJP|1|X|U|2387
2ZJP|1|X|G|2388
2ZJP|1|X|G|2389
2ZJP|1|X|A|2390
2ZJP|1|X|A|2391
2ZJP|1|X|G|2392
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain I
- 50S RIBOSOMAL PROTEIN L15
- Chain U
- 50S RIBOSOMAL PROTEIN L28
Coloring options: