HL_2ZJR_009

3D structure

PDB id

2ZJR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

2.91 Å

Loop

Sequence

CUGGAAAG

Length

8 nucleotides

Bulged bases

2ZJR|1|X|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97270.1

Basepair signature

cWW-tWH-R-R-R

Number of instances in this motif group

15

Unit IDs

2ZJR|1|X|C|316
2ZJR|1|X|U|317
2ZJR|1|X|G|318
2ZJR|1|X|G|319
2ZJR|1|X|A|320
2ZJR|1|X|A|321
2ZJR|1|X|A|322
2ZJR|1|X|G|323

Current chains

Chain X

ribosomal 23S RNA

Nearby chains

Chain P

50S ribosomal protein L22

Chain R

50S ribosomal protein L24