HL_2ZJR_017

3D structure

PDB id

2ZJR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

2.91 Å

Loop

Sequence

UAUUGAAGCA

Length

10 nucleotides

Bulged bases

2ZJR|1|X|C|583

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72498.5

Basepair signature

cWW-tWH-R-R-R

Number of instances in this motif group

63

Unit IDs

2ZJR|1|X|U|575
2ZJR|1|X|A|576
2ZJR|1|X|U|577
2ZJR|1|X|U|578
2ZJR|1|X|G|579
2ZJR|1|X|A|580
2ZJR|1|X|A|581
2ZJR|1|X|G|582
2ZJR|1|X|C|583
2ZJR|1|X|A|584

Current chains

Chain X

ribosomal 23S RNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain I

50S ribosomal protein L15

Chain N

50S ribosomal protein L20

Chain O

50S ribosomal protein L21

Chain Z

50S ribosomal protein L32