HL_2ZJR_070
3D structure
- PDB id
- 2ZJR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.91 Å
Loop
- Sequence
- CCGAAUAG
- Length
- 8 nucleotides
- Bulged bases
- 2ZJR|1|X|A|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_2ZJR_070 not in the Motif Atlas
- Homologous match to HL_7A0S_021
- Geometric discrepancy: 0.3295
- The information below is about HL_7A0S_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28075.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
2ZJR|1|X|C|651
2ZJR|1|X|C|652
2ZJR|1|X|G|653
2ZJR|1|X|A|654
2ZJR|1|X|A|655
2ZJR|1|X|U|656
2ZJR|1|X|A|657
2ZJR|1|X|G|658
Current chains
- Chain X
- ribosomal 23S RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33
- Chain 3
- 50S ribosomal protein L35
Coloring options: