HL_2ZZM_001

3D structure

PDB id

2ZZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complex structure of aTrm5 and tRNALeu

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

CAAGCCUGGCCAAAG

Length

15 nucleotides

Bulged bases (A, C, G, U)

18G, 19G, 20C, 20A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tRNA Leu D-loop

Broad Annotation

tRNA D-loop

Motif group

HL_04221.1

Basepair signature

cWW-cWS-tSH-cWS-F

Number of instances in this motif group

5

Unit IDs

2ZZM|1|B|C|12
2ZZM|1|B|A|13
2ZZM|1|B|A|14
2ZZM|1|B|G|15
2ZZM|1|B|C|16
2ZZM|1|B|C|17
2ZZM|1|B|U|17|||A
2ZZM|1|B|G|18
2ZZM|1|B|G|19
2ZZM|1|B|C|20
2ZZM|1|B|C|20|||A
2ZZM|1|B|A|20|||B
2ZZM|1|B|A|21
2ZZM|1|B|A|22
2ZZM|1|B|G|23

Current chains

Chain B

RNA (84-MER)

Nearby chains

Chain A

Uncharacterized protein MJ0883