HL_30RA_074

3D structure

PDB id

30RA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA, mRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

UUUAUUAAAAA

Length

11 nucleotides

Bulged bases

30RA|1|a|A|1780, 30RA|1|a|U|1781, 30RA|1|a|U|1782, 30RA|1|a|A|1786

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_30RA_074 not in the Motif Atlas

Geometric match to HL_8B0X_073

Geometric discrepancy: 0.0385

The information below is about HL_8B0X_073

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87681.3

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

10

Unit IDs

30RA|1|a|U|1777
30RA|1|a|U|1778
30RA|1|a|U|1779
30RA|1|a|A|1780
30RA|1|a|U|1781
30RA|1|a|U|1782
30RA|1|a|A|1783
30RA|1|a|A|1784
30RA|1|a|A|1785
30RA|1|a|A|1786
30RA|1|a|A|1787

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34

Chain c

Large ribosomal subunit protein uL2