HL_30RB_012

3D structure

PDB id

30RB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CUAACUCCG(PSU)GCCAGCAG

Length

18 nucleotides

Bulged bases

30RB|1|A|C|511, 30RB|1|A|C|518

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RB|1|A|C|507
30RB|1|A|U|508
30RB|1|A|A|509
30RB|1|A|A|510
30RB|1|A|C|511
30RB|1|A|U|512
30RB|1|A|C|513
30RB|1|A|C|514
30RB|1|A|G|515
30RB|1|A|PSU|516
30RB|1|A|G|517
30RB|1|A|C|518
30RB|1|A|C|519
30RB|1|A|A|520
30RB|1|A|G|521
30RB|1|A|C|522
30RB|1|A|A|523
30RB|1|A|G|524

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

Small ribosomal subunit protein uS4

Chain L

Small ribosomal subunit protein uS12