HL_3AM1_008
3D structure
- PDB id
- 3AM1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of O-Phosphoseryl-tRNA kinase complexed with anticodon-stem/loop truncated tRNA(Sec)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GUUCGAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33239.15
- Basepair signature
- cWW-R-R-tWH-R-R-R
- Number of instances in this motif group
- 108
Unit IDs
3AM1|1|B|G|59||||5_555
3AM1|1|B|U|60||||5_555
3AM1|1|B|U|61||||5_555
3AM1|1|B|C|62||||5_555
3AM1|1|B|G|63||||5_555
3AM1|1|B|A|64||||5_555
3AM1|1|B|U|65||||5_555
3AM1|1|B|U|66||||5_555
3AM1|1|B|C|67||||5_555
Current chains
- Chain B
- ASL-truncated tRNA
Nearby chains
- Chain A
- L-seryl-tRNA(Sec) kinase
Coloring options: