HL_3B4C_002
3D structure
- PDB id
- 3B4C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. tengcongensis glmS ribozyme bound to glucosamine-6-phosphate and a substrate RNA with a 2'5'-phosphodiester linkage
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AGGGCAGGGUUUAU
- Length
- 14 nucleotides
- Bulged bases
- 3B4C|1|B|G|41, 3B4C|1|B|C|42, 3B4C|1|B|U|49
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3B4C_002 not in the Motif Atlas
- Homologous match to HL_2Z75_002
- Geometric discrepancy: 0.121
- The information below is about HL_2Z75_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3B4C|1|B|A|38
3B4C|1|B|G|39
3B4C|1|B|G|40
3B4C|1|B|G|41
3B4C|1|B|C|42
3B4C|1|B|A|43
3B4C|1|B|G|44
3B4C|1|B|G|45
3B4C|1|B|G|46
3B4C|1|B|U|47
3B4C|1|B|U|48
3B4C|1|B|U|49
3B4C|1|B|A|50
3B4C|1|B|U|51
Current chains
- Chain B
- glmS ribozyme RNA
Nearby chains
- Chain A
- glmS ribozyme substrate with a 2'5'-phosphodiester linkage
Coloring options: