3D structure

PDB id
3CC2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins
Experimental method
X-RAY DIFFRACTION
Resolution
2.4 Å

Loop

Sequence
GU(OMU)(OMG)UUCGC
Length
9 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: OMU, OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_3CC2_064 not in the Motif Atlas
Homologous match to HL_4V9F_064
Geometric discrepancy: 0.023
The information below is about HL_4V9F_064
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3CC2|1|0|G|2585
3CC2|1|0|U|2586
3CC2|1|0|OMU|2587
3CC2|1|0|OMG|2588
3CC2|1|0|U|2589
3CC2|1|0|U|2590
3CC2|1|0|C|2591
3CC2|1|0|G|2592
3CC2|1|0|C|2593

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain B
50S ribosomal protein L3P
Chain K
50S ribosomal protein L14P

Coloring options:


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