HL_3CC2_075
3D structure
- PDB id
- 3CC2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- UACCCAUCCCGAACA
- Length
- 15 nucleotides
- Bulged bases
- 3CC2|1|9|C|40
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3CC2_075 not in the Motif Atlas
- Homologous match to HL_4V9F_074
- Geometric discrepancy: 0.047
- The information below is about HL_4V9F_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.2
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
3CC2|1|9|U|33
3CC2|1|9|A|34
3CC2|1|9|C|35
3CC2|1|9|C|36
3CC2|1|9|C|37
3CC2|1|9|A|38
3CC2|1|9|U|39
3CC2|1|9|C|40
3CC2|1|9|C|41
3CC2|1|9|C|42
3CC2|1|9|G|43
3CC2|1|9|A|44
3CC2|1|9|A|45
3CC2|1|9|C|46
3CC2|1|9|A|47
Current chains
- Chain 9
- 5S RIBOSOMAL RNA
Nearby chains
- Chain 0
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- 50S ribosomal protein L5P
- Chain N
- 50S ribosomal protein L18P
Coloring options: