3D structure

PDB id
3CCE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A
Experimental method
X-RAY DIFFRACTION
Resolution
2.75 Å

Loop

Sequence
CGCAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_3CCE_048 not in the Motif Atlas
Homologous match to HL_4V9F_048
Geometric discrepancy: 0.0459
The information below is about HL_4V9F_048
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

3CCE|1|0|C|1862
3CCE|1|0|G|1863
3CCE|1|0|C|1864
3CCE|1|0|A|1865
3CCE|1|0|A|1866
3CCE|1|0|G|1867

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain A
50S ribosomal protein L2P
Chain M
50S ribosomal protein L15e

Coloring options:


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