HL_3CCJ_031

3D structure

PDB id

3CCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCGUAACAGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCJ_031 not in the Motif Atlas

Geometric match to HL_5TBW_028

Geometric discrepancy: 0.3638

The information below is about HL_5TBW_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

3CCJ|1|0|G|1195
3CCJ|1|0|C|1196
3CCJ|1|0|G|1197
3CCJ|1|0|U|1198
3CCJ|1|0|A|1199
3CCJ|1|0|A|1200
3CCJ|1|0|C|1201
3CCJ|1|0|A|1202
3CCJ|1|0|G|1203
3CCJ|1|0|C|1204

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains