HL_3CCJ_042

3D structure

PDB id

3CCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

3CCJ|1|0|A|1689, 3CCJ|1|0|A|1691, 3CCJ|1|0|A|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCJ_042 not in the Motif Atlas

Homologous match to HL_4V9F_042

Geometric discrepancy: 0.082

The information below is about HL_4V9F_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_28592.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

11

Unit IDs

3CCJ|1|0|C|1687
3CCJ|1|0|G|1688
3CCJ|1|0|A|1689
3CCJ|1|0|C|1690
3CCJ|1|0|A|1691
3CCJ|1|0|C|1692
3CCJ|1|0|A|1693
3CCJ|1|0|G|1694

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 1

50S ribosomal protein L37e

Chain 2

50S ribosomal protein L39e

Chain R

50S ribosomal protein L22P