HL_3CCQ_051

3D structure

PDB id

3CCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CAUCAGUAG

Length

9 nucleotides

Bulged bases

3CCQ|1|0|U|1996

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCQ_051 not in the Motif Atlas

Homologous match to HL_4V9F_051

Geometric discrepancy: 0.0412

The information below is about HL_4V9F_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

3CCQ|1|0|C|1990
3CCQ|1|0|A|1991
3CCQ|1|0|U|1992
3CCQ|1|0|C|1993
3CCQ|1|0|A|1994
3CCQ|1|0|G|1995
3CCQ|1|0|U|1996
3CCQ|1|0|A|1997
3CCQ|1|0|G|1998

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain K

50S ribosomal protein L14P