3D structure

PDB id
3CCQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
CAUCAGUAG
Length
9 nucleotides
Bulged bases
3CCQ|1|0|U|1996
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_3CCQ_051 not in the Motif Atlas
Homologous match to HL_4V9F_051
Geometric discrepancy: 0.0412
The information below is about HL_4V9F_051
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_20167.2
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
10

Unit IDs

3CCQ|1|0|C|1990
3CCQ|1|0|A|1991
3CCQ|1|0|U|1992
3CCQ|1|0|C|1993
3CCQ|1|0|A|1994
3CCQ|1|0|G|1995
3CCQ|1|0|U|1996
3CCQ|1|0|A|1997
3CCQ|1|0|G|1998

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain K
50S ribosomal protein L14P

Coloring options:


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