HL_3CCQ_069

3D structure

PDB id

3CCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUACAAGAC

Length

9 nucleotides

Bulged bases

3CCQ|1|0|U|2837

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCQ_069 not in the Motif Atlas

Homologous match to HL_4V9F_069

Geometric discrepancy: 0.041

The information below is about HL_4V9F_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

3CCQ|1|0|G|2836
3CCQ|1|0|U|2837
3CCQ|1|0|A|2838
3CCQ|1|0|C|2839
3CCQ|1|0|A|2840
3CCQ|1|0|A|2841
3CCQ|1|0|G|2842
3CCQ|1|0|A|2843
3CCQ|1|0|C|2844

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

50S ribosomal protein L3P

Chain R

50S ribosomal protein L22P

Chain X

50S ribosomal protein L31e