HL_3CCV_037

3D structure

PDB id

3CCV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

3CCV|1|0|U|1505, 3CCV|1|0|U|1506

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCV_037 not in the Motif Atlas

Homologous match to HL_4V9F_037

Geometric discrepancy: 0.0411

The information below is about HL_4V9F_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

14

Unit IDs

3CCV|1|0|G|1498
3CCV|1|0|U|1499
3CCV|1|0|U|1500
3CCV|1|0|A|1501
3CCV|1|0|A|1502
3CCV|1|0|U|1503
3CCV|1|0|A|1504
3CCV|1|0|U|1505
3CCV|1|0|U|1506
3CCV|1|0|C|1507

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain P

50S ribosomal protein L19e

Chain S

50S ribosomal protein L23P