HL_3CUN_004

3D structure

PDB id

3CUN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Aminoacyl-tRNA synthetase ribozyme

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CUN_004 not in the Motif Atlas

Geometric match to HL_4RUM_002

Geometric discrepancy: 0.0833

The information below is about HL_4RUM_002

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

3CUN|1|D|C|107
3CUN|1|D|G|108
3CUN|1|D|A|109
3CUN|1|D|A|110
3CUN|1|D|A|111
3CUN|1|D|G|112

Current chains

Chain D

RNA (92-MER)

Nearby chains