HL_3CUN_005

3D structure

PDB id

3CUN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Aminoacyl-tRNA synthetase ribozyme

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUUGCACUCCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CUN_005 not in the Motif Atlas

Geometric match to HL_2ZNI_001

Geometric discrepancy: 0.1276

The information below is about HL_2ZNI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

3CUN|1|D|C|129
3CUN|1|D|A|130
3CUN|1|D|U|131
3CUN|1|D|U|132
3CUN|1|D|G|133
3CUN|1|D|C|134
3CUN|1|D|A|135
3CUN|1|D|C|136
3CUN|1|D|U|137
3CUN|1|D|C|138
3CUN|1|D|C|139
3CUN|1|D|G|140

Current chains

Chain D

RNA (92-MER)

Nearby chains

Chain B

U1 small nuclear ribonucleoprotein A