HL_3CXC_051

3D structure

PDB id

3CXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUCAGUAG

Length

9 nucleotides

Bulged bases

3CXC|1|0|U|1996

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CXC_051 not in the Motif Atlas

Homologous match to HL_4V9F_051

Geometric discrepancy: 0.0565

The information below is about HL_4V9F_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61418.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

3CXC|1|0|C|1990
3CXC|1|0|A|1991
3CXC|1|0|U|1992
3CXC|1|0|C|1993
3CXC|1|0|A|1994
3CXC|1|0|G|1995
3CXC|1|0|U|1996
3CXC|1|0|A|1997
3CXC|1|0|G|1998

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain J

RIBOSOMAL PROTEIN L14