3D structure

PDB id
3DH3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of RluF in complex with a 22 nucleotide RNA substrate
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CGUGAG
Length
6 nucleotides
Bulged bases (A, C, G, U)
2596U
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_29960.1
Basepair signature
cWW-tSW-F
Number of instances in this motif group
59

Unit IDs

3DH3|1|E|C|2594
3DH3|1|E|G|2595
3DH3|1|E|U|2596
3DH3|1|E|G|2597
3DH3|1|E|A|2598
3DH3|1|E|G|2599

Current chains

Chain E
stem loop fragment of E. Coli 23S RNA

Nearby chains

Chain A
Ribosomal large subunit pseudouridine synthase F
Chain B
Ribosomal large subunit pseudouridine synthase F
Chain F
stem loop fragment of E. Coli 23S RNA

Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.0951 s