HL_3DH3_003

3D structure

PDB id

3DH3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of RluF in complex with a 22 nucleotide RNA substrate

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

3DH3|1|F|U|2596

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91680.1

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

3DH3|1|F|C|2594
3DH3|1|F|G|2595
3DH3|1|F|U|2596
3DH3|1|F|G|2597
3DH3|1|F|A|2598
3DH3|1|F|G|2599

Current chains

Chain F

stem loop fragment of E. Coli 23S RNA

Nearby chains

Chain A

Ribosomal large subunit pseudouridine synthase F

Chain B

Ribosomal large subunit pseudouridine synthase F

Chain E

stem loop fragment of E. Coli 23S RNA