3D structure

PDB id
3G4S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal structure of Tiamulin bound to the large ribosomal subunit
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
CAUCCCG
Length
7 nucleotides
Bulged bases
3G4S|1|9|C|40
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_3G4S_071 not in the Motif Atlas
Homologous match to HL_5J7L_203
Geometric discrepancy: 0.1692
The information below is about HL_5J7L_203
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_47787.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
10

Unit IDs

3G4S|1|9|C|37
3G4S|1|9|A|38
3G4S|1|9|U|39
3G4S|1|9|C|40
3G4S|1|9|C|41
3G4S|1|9|C|42
3G4S|1|9|G|43

Current chains

Chain 9
5S ribosomal RNA

Nearby chains

Chain 0
Large subunit ribosomal RNA; LSU rRNA
Chain D
50S ribosomal protein L5P
Chain N
50S ribosomal protein L18P

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