HL_3G78_002

3D structure

PDB id

3G78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insight into group II intron catalysis from revised crystal structure

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UGAAGGCAGAAGUAA

Length

15 nucleotides

Bulged bases

3G78|1|A|A|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77981.1

Basepair signature

cWW-tSH-tHW-cSH-R-R-R-R-R-R-R

Number of instances in this motif group

1

Unit IDs

3G78|1|A|U|47
3G78|1|A|G|48
3G78|1|A|A|49
3G78|1|A|A|50
3G78|1|A|G|51
3G78|1|A|G|52
3G78|1|A|C|53
3G78|1|A|A|54
3G78|1|A|G|55
3G78|1|A|A|56
3G78|1|A|A|57
3G78|1|A|G|58
3G78|1|A|U|59
3G78|1|A|A|60
3G78|1|A|A|61

Current chains

Chain A

Group II intron

Nearby chains