HL_3G78_005

3D structure

PDB id

3G78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insight into group II intron catalysis from revised crystal structure

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UGCAUAACAA

Length

10 nucleotides

Bulged bases

3G78|1|A|G|179, 3G78|1|A|C|180

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35446.1

Basepair signature

cWW-R-R-R-R-R

Number of instances in this motif group

1

Unit IDs

3G78|1|A|U|178
3G78|1|A|G|179
3G78|1|A|C|180
3G78|1|A|A|181
3G78|1|A|U|182
3G78|1|A|A|183
3G78|1|A|A|184
3G78|1|A|C|185
3G78|1|A|A|186
3G78|1|A|A|187

Current chains

Chain A

Group II intron

Nearby chains

Chain Z

Ligated EXON product