HL_3HJW_001
3D structure
- PDB id
- 3HJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.35 Å
Loop
- Sequence
- UGAUCAAUGAG
- Length
- 11 nucleotides
- Bulged bases (A, C, G, U)
- 26U, 27C, 30U
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40310.1
- Basepair signature
- cWW-tSH-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
3HJW|1|D|U|23
3HJW|1|D|G|24
3HJW|1|D|A|25
3HJW|1|D|U|26
3HJW|1|D|C|27
3HJW|1|D|A|28
3HJW|1|D|A|29
3HJW|1|D|U|30
3HJW|1|D|G|31
3HJW|1|D|A|32
3HJW|1|D|G|33
Current chains
- Chain D
- RNA (58-MER)
Nearby chains
- Chain B
- Ribosome biogenesis protein Nop10
- Chain C
- 50S ribosomal protein L7Ae
Coloring options: