HL_3IYR_003

3D structure

PDB id

3IYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

tmRNA-SmpB: a journey to the center of the bacterial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

GCCCUGCCGGGGGC

Length

14 nucleotides

Bulged bases

3IYR|1|A|C|144, 3IYR|1|A|U|146, 3IYR|1|A|G|152

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3IYR|1|A|G|142
3IYR|1|A|C|143
3IYR|1|A|C|144
3IYR|1|A|C|145
3IYR|1|A|U|146
3IYR|1|A|G|147
3IYR|1|A|C|148
3IYR|1|A|C|149
3IYR|1|A|G|150
3IYR|1|A|G|151
3IYR|1|A|G|152
3IYR|1|A|G|153
3IYR|1|A|G|154
3IYR|1|A|C|155

Current chains

Chain A

tmRNA

Nearby chains