HL_3IZ4_005

3D structure

PDB id

3IZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified E. coli tmRNA in the resume state with the tRNA-like domain in the ribosomal P site interacting with the SmpB

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

GUGUCCGUCC

Length

10 nucleotides

Bulged bases

3IZ4|1|A|U|277

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3IZ4|1|A|G|276
3IZ4|1|A|U|277
3IZ4|1|A|G|278
3IZ4|1|A|U|279
3IZ4|1|A|C|280
3IZ4|1|A|C|281
3IZ4|1|A|G|282
3IZ4|1|A|U|283
3IZ4|1|A|C|284
3IZ4|1|A|C|285

Current chains

Chain A

Modified E. coli transfer-messenger RNA

Nearby chains