HL_3J5L_053
3D structure
- PDB id
- 3J5L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli 50S subunit with ErmBL nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.6 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 3J5L|1|A|G|2250
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J5L_053 not in the Motif Atlas
- Homologous match to HL_4WF9_049
- Geometric discrepancy: 0.0778
- The information below is about HL_4WF9_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_85367.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
3J5L|1|A|C|2248
3J5L|1|A|U|2249
3J5L|1|A|G|2250
3J5L|1|A|G|2251
3J5L|1|A|G|2252
3J5L|1|A|G|2253
3J5L|1|A|C|2254
3J5L|1|A|G|2255
3J5L|1|A|G|2256
Current chains
- Chain A
- 23S ribsomal RNA
Nearby chains
- Chain 7
- 5'-R(*CP*CP*A)-3'
- Chain M
- 50S ribosomal protein L16
- Chain W
- 50S ribosomal protein L27
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