HL_3J6B_003
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUAAAC
- Length
- 6 nucleotides
- Bulged bases
- 3J6B|1|A|A|155
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J6B_003 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.1623
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.4
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
3J6B|1|A|G|153
3J6B|1|A|U|154
3J6B|1|A|A|155
3J6B|1|A|A|156
3J6B|1|A|A|157
3J6B|1|A|C|158
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain 3
- 54S ribosomal protein L27, mitochondrial
- Chain P
- 54S ribosomal protein L41, mitochondrial
- Chain Q
- 54S ribosomal protein L40, mitochondrial
- Chain Y
- 54S ribosomal protein L34, mitochondrial
Coloring options: