HL_3J6B_010
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAUUAUAUUA
- Length
- 10 nucleotides
- Bulged bases
- 3J6B|1|A|U|442, 3J6B|1|A|U|443, 3J6B|1|A|U|447
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J6B_010 not in the Motif Atlas
- Geometric match to HL_5J7L_200
- Geometric discrepancy: 0.2835
- The information below is about HL_5J7L_200
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_08100.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
3J6B|1|A|U|440
3J6B|1|A|A|441
3J6B|1|A|U|442
3J6B|1|A|U|443
3J6B|1|A|A|444
3J6B|1|A|U|445
3J6B|1|A|A|446
3J6B|1|A|U|447
3J6B|1|A|U|448
3J6B|1|A|A|449
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain 4
- 54S ribosomal protein L51, mitochondrial
- Chain 5
- 54S ribosomal protein L3, mitochondrial
- Chain H
- 54S ribosomal protein L23, mitochondrial
- Chain N
- 54S ribosomal protein L49, mitochondrial
- Chain O
- 54S ribosomal protein L22, mitochondrial
Coloring options: