HL_3J6B_034

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUAACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J6B_034 not in the Motif Atlas

Homologous match to HL_7RQB_047

Geometric discrepancy: 0.2342

The information below is about HL_7RQB_047

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

3J6B|1|A|U|1773
3J6B|1|A|U|1774
3J6B|1|A|A|1775
3J6B|1|A|A|1776
3J6B|1|A|C|1777
3J6B|1|A|G|1778

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain b

54S ribosomal protein L25, mitochondrial